TOMATOMICS

tomatomics  The Tomato Integrated Database

9 Micro-Tom cDNA Libraries
A Total of 125,883 ESTs
                 
Library Origin Type Note # of ESTs EST Acc. (DDBJ) # of HTC HTC Acc. (DDBJ)
LA Leaf Conventional cDNA 0.5-1 kb insert size 6,535 BP875611-BP911434 --- ---
LB Leaf Conventional cDNA 1-3 kb insert size 3,316
LC Leaf conventional cDNA 3-10 kb insert size 6,270
FA Fruit Conventional cDNA 0.5-1 kb insert size 13,653
FB Fruit Conventional cDNA 1-12 kb insert size 6,237
FC Fruit Full-length cDNA Maturing fruits 7,981 BW684914-BW692959 1,126 AB211519-AB211522,
AB211526,
AK224591-AK224910,
AK246135-AK246935
LEFL1 Leaf Full-length cDNA Treatment with pathogen 30,872 DB678295-DB708973 7,235 AK246936-AK247723,
AK319176-AK325622
Viruses CMV or ToMV
Fungi Pythium oligandrum
Non-pathogenic Alternaria alternata
Corynespora cassiicola
Cladosporium fulvum
Fusarium oxysporum f. sp. lycoperrsici
Non-pathogenic Fusarium oxysporum
Bacteria P. syringae pv. tomato DC3000
P. syringae pv. tabaci 6605
Other treatment ; JA treatment, SA treatment
LEFL2 Fruit Full-length cDNA Mature green, Breaker, Turning, Red ripe 19,948 DB708974-DB727670 3,235 AK247724-AK248077,
AK325623-AK328503
LEFL3 Root Full-length cDNA Roots of tomato with/without flower, Fusarium-treated root 31,071 FS179211-FS206426 1,631 AK328504-AK330134
* Repeat resions and low-quality sequences were NOT removed (125,883 Micro-Tom ESTs).