DDBJ遺伝子配列・発現情報の登録・公開

Posted by: kyanobi

  1. Naoki Yamamoto, Tomoyuki Takano, Keisuke Tanaka, Taichiro Ishige, Shin Terashima, Chisato Endo, Takamtisu Kurusu, Shunsuke Yajima, Kentaro Yano, Yuichi Tada (2015) Sporobolus virginicus, ソナレシバのRNA-seqデータ, DRA002969.
  2. Yamamoto, N., Fujiwara, S., Takatsuka, Y., Hirokawa, Y., Tsuzuki, M., Kobayashi, M., Ozaki, S., Suda, K., Asamizu, E., Yokoyama, K., Shibata, D., Tabata, S., Yano, K. (2014) Pleurochrysis haptonemofera EST, 円石藻EST, HX954614 - HX969076 (14463 entries), 2016-01.
  3. RNA-Seq of 9 developmental stages in a fern, Lygodium japonicum, カニクサのトランスクリプトーム・データ, DRA002757, 2015-01-10.
  4. Nakatsuka, A., Nakagawa, T., Abe, R., Yano, K. (2013) Diospyros kaki mRNA. 4,701件のカキ (Diospyros kaki Thunb.) のEST. FY982194 - FY986894 (4,701 entries).
  5. Habu, T., Yamane, H., Igarashi, K., Hamada, K., Yano, K. , Tao, R. (2012) 454-Pyrosequencing of the Transcriptome in Leaf and Flower Buds of Japanese Apricot (Prunus mume Sieb. et Zucc.) at Different Dormant Stages. ウメ・トランスクリプトーム配列 (454シーケンサー). DDBJ Sequence Read Archive (study: DRP000532, samples: DRS001305 - DRS001314, experiments: DRX001359 - DRX001369, runs: DRR001898 - DRR001908).
  6. Ogihara, Y., Kawaura, K., Manickavelu, A., Suzuki, A., Abe, R., Nagayama, T., Sutton, T., Kohara, Y., Shin-I, T., Yano, K. (2012) Triticum aestivum cDNA, clone. 211,921件のコムギの芽生え地上部 (shoot) , 根, 葉, 芽生えに由来するEST登録. Acc. HX000001 - HX201765, HX247045 - HX257200 (211,921 entries).
  7. Fujii, S., Toda, T., Kikuchi, S., Suzuki, R., Yokoyama, K., Tsuchida, H., Yano, K., Toriyama, K. (2011) Transcriptome map of plant mitochondria reveals islands of unexpected transcribed regions. CIBEX Accession : CBX156.
  8. Aoki, K., Yano, K., Suzuki, A., Suda, K., Suzuki, T., Sakurai, N., Suzuki, H., Takahashi, H., Watanabe, Y., Arie, T., Ichinose, Y., Kodama, M., Ezura, H., Shibata, D. (2009) Solanum lycopersicum cDNA. 10,959件のトマト完全長cDNAの登録. Acc. AK319176 - AK330134 (10,959 entries).
  9. Aoki, K., Yano, K., Suzuki, A., Suda, K., Suzuki, T., Kurabayashi, A., Sato, Y., Yazawa, K., Satoh, S., Kikuchi, M., Fukushima, S., Okabe, A., Arie, T., Ezura, H., Shibata, D. (2009) Solanum lycopersicum cv Micro-Tom root Solanum lycopersicum cDNA clone. 矮性トマト品種マイクロトムの根に由来するEST登録. Acc. FS179211 - FS206426 (27,216 entries).
  10. Nakagawa, T., Nakatsuka, A., Yano, K., Yasugahira, S., Nakamura, R., Sun, N., Itai, A., Suzuki, T., Itamura, H. (2008) Diospyros kaki ovary and young fruit pre-flowering to post-flowering stages Diospyros kaki cDNA clone KA003_C11 5', mRNA sequence. カキ品種サイジョウのEST. Acc. DC583395 - DC592851 (9,457件).
  11. Aoki, K., Yano, K., Suda, K., Suzuki, T., Watanabe, M., Tsugane, T., Sakurai, N., Suzuki, H., Shibata, D.(2007) Full-length cDNA sequences from tomato (Solanum lycopersicum cv Micro-Tom) fruit and leaves. 1943件の矮性トマト品種マイクロトムの葉と果実に由来する完全長cDNA登録. Acc. AK246135 - AK248077.
  12. Aoki, K., Yano, K., Suda, K., Suzuki, T., Sakurai, N., Suzuki, H., Takahashi, H., Watanabe, Y., Arie, T., Ichinose, Y., Kodama, M., Ezura, H., Shibata, D.(2006) Full-length cDNA sequences from tomato (Solanum lycopersicum cv Micro-Tom) leaves treated with pathogens. 30,679件の矮性トマト品種マイクロトムの病原微生物を接種した葉EST登録. Acc. DB678295 - DB708973.
  13. Aoki, K., Yano, K., Suda, K., Suzuki, T., Sakurai, N., Suzuki, H., Narita, T., Shin-i, T., Kohara, Y., Shibata, D. (2006) Full-length cDNA sequences from tomato (Solanum lycopersicum cv Micro-Tom) fruit. 18,697件の矮性トマト品種マイクロトムの果実由来のEST登録. Acc. DB708974 - DB727670.
  14. Aoki, K., Yano, K., Suda, K., Suzuki, T., Watanabe, M., Tsugane, T., Sakurai, N., Suzuki, H., Shibata, D.(2006) Sequences of full-length cDNA clones from tomato (Solanum lycopersicum cv Micro-Tom) fruit. 320件の矮性トマト品種マイクロトムの果実完全長cDNA配列公開. Acc. AK224591 - AK224910 July. 2006.
  15. Sakurai, N., Yano, K., Nishida, H., Namai, K., Sakai, Y., Suzuki, H., Shibata, D. (2006) Database of Expressed sequence tags from a Legume, Lotus corniculatus var. japonicus. 39,008件のミヤコグサのEST公開. Acc. BW594281 - BW633288 Apr. 2006.
  16. Tsugane, T., Watanabe, M., Yano, K., Suzuki, H., Sakurai, N., Shibata, D. (2005) Expressed sequence tags of full-length cDNA clones prepared from the laboratory-grown miniature tomato (Lycopersicon esculentum) cultivar Micro-Tom. 8,046件の矮性トマト品種マイクロトムの完全長cDNAクローンのEST公開. Acc. BW684914 - BW692959 Apr. 2005.
  17. Tsugane, T., Watanabe, M., Yano, K., Suzuki, H., Sakurai, N., Shibata, D. (2005) Expressed sequence tags of full-length cDNA clones from the miniature tomato (Lycopersicon esculentum) cultivar Micro-Tom. 矮性トマト品種マイクロトムの9個の遺伝子の完全長DNA配列とアミノ酸配列. Acc. AB211518 - AB211526 Apr. 2005.
  18. Yamamoto, N., Tsugane, T., Watanabe, M., Yano, K., Maeda, F., Kuwata, C., Moez, T., Nishimura, S., Shibata, D. (2005) Expressed sequence tags from the laboratory-grown miniature tomato (Lycopersicon esculentum) cultivar Micro-Tom and mining for single nucleotide polymorphisms and insertions/deletions in tomato cultivars. 35,824件の矮性トマト品種マイクロトムのEST公開. Acc. BP875611 - BP911434 Jan. 2005.