This database contains the result obtained from de nove assembly of Lygodium japonicum transcriptome contigs and isotigs using reads of Illumina and 454.
We provide various informations on, assembly accuracy, functional annotation and expression pattern analysis.
This project is a joint research of Meiji University and Nagoya University.
Koichiro Aya, Masaaki Kobayashi, Junmu Tanaka, Hajime Ohyanagi, Takayuki Suzuki, Kenji Yano, Tomoyuki Takano, Kentaro Yano, Makoto Matsuoka (2015) De Novo Transcriptome Assembly of a Fern, Lygodium japonicum, and a Web Resource Database, Ljtrans DB. Plant and Cell Physiology 56(1):e5 doi:10.1093/pcp/pcu184 (January 2015, Epub: December 4, 2014)